You are leaving the Ibis Biosciences website.

Do you wish to continue?

Sample Preparation

Ibis Biosciences has developed sample preparation protocols that effectively isolate nucleic acid from bacteria, viruses, and fungi. Ibis scientists can also recommend isolation methods, both manual and automated, for a variety of sample types listed below. Sample types include environmental samples (air samples from dry filter units, surface swabs, and water samples), research samples (bacterial colonies and bacterial or viral cultures), biological samples (throat swabs, nasal swabs, nasopharyngeal swabs, nasal washes, sputum, and skin swabs), and food samples (meat, dairy, and produce). For human forensics samples, Ibis has also developed protocols for hair, teeth, bone, and blood.

Efficient cell lysis is achieved either through mechanical means (using zirconium beads) or a chemical lysis involving the use of chaotropic agents (using kits purchased from companies such as Qiagen or Ambion). Simple, inexpensive methods, such as boiling followed by centrifugation or magnetic bead-based purification, are also sufficient for some applications, such as genotyping of isolated bacterial colonies. The end-result of the sample isolation process is a nucleic acid preparation suitable for PCR.

Sample Type Sub-type Isolation Method
Research Bacterial Culture Boiling preparation
Phenolic chaotropic reagents
Silica gel membrane
Viral Culture Phenolic chaotropic reagents
Silica gel membrane
Environmental Air filter
Surface swab
Water
Soil
Silica gel membrane (Qiagen or Ambion commercial kits
Biological Throat swab
Nasal swab
Nasopharyngeal swab
Nasal wash
Sputum
Skin swab
Whole blood
Silica gel membrane (Qiagen or Ambion commercial kits)
Forensic Whole blood Silica gel membrane
Hair
Teeth
Bone
Chemical extraction